The programme for the #bc2basel tutorials & workshops is out! From #geneexpression analysis to #machinelearning or #datavisualization, beginner or advanced: boost your #bioinformatics skills!
Register to make sure to secure your spot (limited seats): https://tinyurl.com/3y8ay2d6
Learn to analyze genetic lineage tracing data with TiDeTree in BEAST 2! Gain hands-on experience in setting up and running analyses, from preparing data to interpreting results.
Practical exercises will allow participants to apply TiDeTree to example datasets, enhancing their understanding of its applications.
Register: https://tinyurl.com/3y8ay2d6
Organized by Sophie Seidel & Antoine Zwaans (ETH Zurich)
Struggling to investigate your target gene by mapping mutations, together with functional/genomic annotation on protein 3D structure? This tutorial will enable you to unlock the potential of the Genomics 2 Proteins (G2P) portal, an integrated and interactive platform to connect genetic screening output to protein sequences and structures.
Tutorial taught by Sumaiya Iqbal and Jordan Safer (Broad Institute of MIT and Harvard)
Mo 8 Sept at #bc2basel
Register here: tinyurl.com/3y8ay2d6
Join our tutorial to explore the new Ensembl platform and Ensembl VEP (Variant Effect Predictor). Gain hands-on experience with the updated interface and learn to analyse and annotate various genomic data.
Register here: https://tinyurl.com/3y8ay2d6
Workshop organized by Jorge Batista da Rocha, Louisse Mirabueno and Aleena Mushtaq (EMBL-EBI)
@P_Palagi @valentynbez
#Genomics #Ensembl #bc2basel #BioinformaticsTraining
Have you ever tried to combine symbolic & neural AI to tackle biomedical challenges? This tutorial will enable you to harness the power of biomedical knowledge graphs & LLM to support evidence-based discovery with concrete examples in antibiotic research & oncology.
Tutorial organized by Maxime Delmas and Andre Freitas, from the Idiap Research Institute, CH
8 Sept, 13:00 - 16:15, at #bc2basel
Register here: https://tinyurl.com/3y8ay2d6
Interested in building and managing microbial genomic databases? Join the hands-on tutorial on Loculus & learn how to:
• set up and customize Loculus for lab or global use
• streamline data storage, preprocessing & analysis
• build your own prototype instance during the session
Taught by @chaoranchen & Anna Parker, from @ethzurich.bsky.social@bsky.brid.gy
8 Sept, 9:00 - 16:15, at #bc2basel
Register here: https://tinyurl.com/3y8ay2d6
Have an idea for a scientific resource, but not sure how to build it? Join this [BC]² tutorial that will guide you through the full lifecycle of developing tools, from identifying your audience & building MVPs, to creating user-friendly interfaces, secure APIs, & sustainable long-term strategies.
Taught by Qingyao Huang & Damian Szklarczyk (SIB)
Mon 8 Sept at #bc2basel
Register: https://tinyurl.com/3y8ay2d6
#bioinformatics #OpenScience #FAIRdata
@P_Palagi @valentynbez
How to make health data more accessible, secure & research-ready across national systems? Join this workshop with experts from
&
as they share insights from national initiatives & tackle the challenges of applying FAIR principles to real-world health data.
Presenters: Caroline Boenisch (Hochschule Stralsund, DE), Sabine Österle & Vasundra Touré (SIB), Dagmar Waltemath and Judith Wodke (Greifswald Uni Hospital, DE)
Mo 8 Sept at #bc2basel
Register: https://tinyurl.com/3y8ay2d6